Clean up references to deleted scripts and pattern system

- Removed references to validate-references.sh from YAML files
- Removed expand-references.sh from settings.local.json
- Cleaned up @pattern/@flags references from shared files
- Updated documentation to reflect current no-code implementation
- Simplified reference-index.yml to remove @include patterns

This cleanup removes confusion from the abandoned pattern reference
system while maintaining all functionality.

🤖 Generated with [Claude Code](https://claude.ai/code)

Co-Authored-By: Claude <noreply@anthropic.com>

.claude/commands/deploy.md

@@ -1,6 +1,58 @@
-@include shared/constants.yml#Process_Symbols
+| Symbol | Meaning | | Abbrev | Meaning |
+|--------|---------|---|--------|---------|
+| → | leads to | | cfg | configuration |
+| & | and/with | | impl | implementation |
+| w/ | with | | perf | performance |
+| @ | at/located | | ops | operations |
+| > | greater than | | val | validation |
+| ∀ | for all/every | | req | requirements |
+| ∃ | exists/there is | | deps | dependencies |
+| ∴ | therefore | | env | environment |
+| ∵ | because | | db | database |
+| ≡ | equivalent | | api | interface |
+| ≈ | approximately | | docs | documentation |
+| 📁 | directory/path | | std | standard |
+| 🔢 | number/count | | def | default |
+| 📝 | text/string | | ctx | context |
+| ⚙ | setting/config | | err | error |
+| 🎛 | control/flags | | exec | execution |
+| 🔧 | configuration | | qual | quality |
+| 📋 | group/category | | rec | recovery |
+| 🚨 | critical/urgent | | sev | severity |
+| ⚠ | warning/caution | | resp | response |
+| 🔄 | retry/recovery | | esc | escalation |
+| ✅ | success/fixed | | tok | token |
+| ❌ | failure/error | | opt | optimization |
+| ℹ | information | | UX | user experience |
+| ⚡ | fast/quick | | UI | user interface |
+| 🐌 | slow/delayed | | C | critical |
+| ✨ | complete/done | | H | high |
+| 📖 | read operation | | M | medium |
+| ✏ | edit operation | | L | low |
+| 🗑 | delete operation | | |
 
-@include shared/command-templates.yml#Universal_Flags
+## Command Execution
+Execute: immediate. --plan→show plan first
+Legend: Generated based on symbols used in command
+Purpose: "[Action][Subject] in $ARGUMENTS"
+
+## Universal Flags
+--plan: "Show execution plan before running"
+--uc: "UltraCompressed mode (~70% token reduction)"
+--ultracompressed: "Alias for --uc"
+--think: "Multi-file analysis w/ context (4K tokens)"
+--think-hard: "Deep architectural analysis (10K tokens)"
+--ultrathink: "Critical system redesign (32K tokens)"
+--c7: "Enable Context7→library documentation lookup"
+--seq: "Enable Sequential→complex analysis & thinking"
+--magic: "Enable Magic→UI component generation"
+--pup: "Enable Puppeteer→browser automation & testing"
+--all-mcp: "Enable all MCP servers"
+--no-mcp: "Disable all MCP servers (native tools only)"
+--no-c7: "Disable Context7 specifically"
+--no-seq: "Disable Sequential thinking specifically"
+--no-magic: "Disable Magic UI builder specifically"
+--no-pup: "Disable Puppeteer specifically"
 
 Deploy application to env specified in $ARGUMENTS.
 
@@ -48,8 +100,53 @@ Safety:
 - Always have rollback plan | Backups before deployment
 - Monitor key metrics during deployment | Gradual rollout→major changes
 
-@include shared/command-templates.yml#Research_Requirements
 
-@include shared/command-templates.yml#Report_Output
+```yaml
+Mandatory_Research_Flows:
+  External_Library_Research:
+    Step_1: "Identify library/framework mentioned"
+    Step_2: "Context7 lookup for official documentation"
+    Step_3: "Verify API patterns and examples"
+    Step_4: "Check version compatibility"
+    Step_5: "Document findings in implementation"
+    
+  Pattern_Research:
+    Step_1: "Search existing codebase for similar patterns"
+    Step_2: "Magic component search if UI-related"
+    Step_3: "WebSearch for official documentation"
+    Step_4: "Validate approach with Sequential thinking"
+    Step_5: "Document pattern choice rationale"
+    
+  API_Integration_Research:
+    Step_1: "Official documentation lookup"
+    Step_2: "Authentication requirements"
+    Step_3: "Rate limiting and error handling"
+    Step_4: "SDK availability and examples"
+    Step_5: "Integration testing approach"
+```
 
-@include shared/constants.yml#Success_Messages
+
+```yaml
+Standard_Notifications:
+  Operation_Start: "▶ Starting {operation}"
+  Operation_Complete: "✅ {operation} completed successfully"
+  File_Created: "📝 Created: {file_path}"
+  File_Updated: "✏ Updated: {file_path}"
+  Report_Generated: "📄 Report saved to: {path}"
+  Error_Occurred: "❌ {operation} failed: {reason}"
+  Warning_Issued: "⚠ {warning_message}"
+  Info_Message: "ℹ {information}"
+
+Output_Notifications:
+  Success_Format: "✅ {operation} completed in {duration}"
+  Error_Format: "❌ {operation} failed: {error_details}"
+  Warning_Format: "⚠ {warning}: {details}"
+  Info_Format: "ℹ {message}"
+  Progress_Format: "🔄 {operation}: {current}/{total} ({percentage}%)"
+```
+
+## Success Messages
+✅ {operation} completed successfully
+📝 Created: {file_path}
+✏ Updated: {file_path}
+✨ Task completed: {task_title}