🔧 Fix command syntax inconsistencies and improve documentation clarity

## Command Syntax Standardization
- Fix lowercase "superclaude" → "SuperClaude" in installation.md
- Distinguish between terminal commands (SuperClaude install) and Claude Code commands (/sc:*)
- Add clear command context headers to all major documentation files

## Documentation Improvements
- Add command reference tables to key guides
- Create visual distinction markers (🖥️ Terminal vs 💬 Claude Code)
- Update verification sections with proper command separation
- Fix content duplications in Developer-Guide and Getting-Started files

## Cross-Reference Updates
- Standardize all documentation links to use Docs/ prefix structure
- Replace invalid email addresses with anton.knoery@gmail.com
- Remove non-existent team references from security documentation

## Files Enhanced
- Getting-Started: installation.md, quick-start.md with command clarity
- User-Guide: commands.md with comprehensive command context
- Reference: troubleshooting.md, common-issues.md with mixed command support
- Root files: README.md, CONTRIBUTING.md, SECURITY.md link updates

This resolves command confusion between installation (terminal) and development (/sc:) commands.

🤖 Generated with Claude Code

Co-Authored-By: Claude <noreply@anthropic.com>

Docs/Reference/common-issues.md

@@ -1,10 +1,12 @@
 # Common Issues Guide
 
+> **Command Context**: This guide covers both **Terminal Commands** (for installation/setup issues) and **Claude Code Commands** (`/sc:` for development issues). Each section is clearly marked.
+
 **Quick Resolution Focus**: Most common SuperClaude issues can be resolved in under 5 minutes with the right diagnostic approach. This guide provides systematic troubleshooting methods for installation, basic commands, and platform-specific problems.
 
 **Problem Classification**: Issues are categorized by type for fast navigation - installation failures, command execution problems, and platform-specific compatibility issues.
 
-## Installation Issues
+## 🖥️ Installation Issues (Terminal Commands)
 
 ### Permission and Access Problems
 

Docs/Reference/examples-cookbook.md

@@ -154,7 +154,7 @@
 - [Commands Reference](../User-Guide/commands.md) - Complete command documentation
 - [Agents Guide](../User-Guide/agents.md) - Multi-agent coordination
 - [MCP Servers](../User-Guide/mcp-servers.md) - Enhanced capabilities
-- [Best Practices](best-practices.md) - Optimization strategies
+- [Best Practices](quick-start-practices.md) - Optimization strategies
 
 **Community**:
 - [GitHub Discussions](https://github.com/SuperClaude-Org/SuperClaude_Framework/discussions) - Community support

Docs/Reference/troubleshooting.md

@@ -1,5 +1,7 @@
 # SuperClaude Troubleshooting Guide
 
+> **Command Context**: This guide covers both **Terminal Commands** (for installation issues) and **Claude Code Commands** (`/sc:` for development issues). Look for section headers to know which type to use.
+
 **Comprehensive Problem Resolution**: Step-by-step solutions for common SuperClaude issues, from installation problems to advanced configuration challenges. Each solution includes diagnosis steps, resolution procedures, and prevention strategies.
 
 **Quick Resolution Focus**: Most issues can be resolved in under 5 minutes with the right diagnostic approach. This guide provides systematic troubleshooting methods to get you back to productive development quickly.
@@ -1212,7 +1214,7 @@ time /sc:analyze . --scope module        # Module-scoped analysis
 
 **Advanced Topics:**
 - [Examples Cookbook](examples-cookbook.md) - Working examples and practical troubleshooting scenarios
-- [Best Practices](best-practices.md) - Performance optimization and efficiency troubleshooting
+- [Best Practices](quick-start-practices.md) - Performance optimization and efficiency troubleshooting
 - [Technical Architecture](../Developer-Guide/technical-architecture.md) - Deep system understanding for complex issues
 
 ### Developer Resources
@@ -1231,7 +1233,7 @@ time /sc:analyze . --scope module        # Module-scoped analysis
 **Immediate Help:**
 - Installation Issues → [Installation Guide](../Getting-Started/installation.md)
 - Command Problems → [Commands Reference](../User-Guide/commands.md)
-- Performance Issues → [Best Practices](best-practices.md)
+- Performance Issues → [Best Practices](quick-start-practices.md)
 - Configuration Issues → [MCP Servers](../User-Guide/mcp-servers.md)
 
 **Learning Resources:**