1. Installer will suggest removal or backup of your .bmad-method folder. You can choose to exit the installer and handle this cleanup, or allow the install to continue. Technically you can have both v4 and v6 installed, but it is not recommended. All BMad content and modules will be installed under a .bmad folder, fully segregated.
- Located in IDE config folders, for example claude: `.claude/commands/BMad/agents`, `.claude/commands/BMad/tasks`, etc.
- NOTE: if the upgrade and install of v6 finished, the new commands will be under `.claude/commands/bmad/<module>/agents|workflows`
- Note 2: If you accidentally delete the wrong/new bmad commands - you can easily restore them by rerunning the installer, and choose quick update option, and all will be reapplied properly.
Aside from .bmad-method - if you have any of these others installed also, again its recommended to remove them and use the V6 equivalents, but its also fine if you decide to keep both. But it is not recommended to use both on the same project long term.
After running the v6 installer, if you kept the paths the same as the installation suggested, you will need to move a few files, or run the installer again. It is recommended to stick with these defaults as it will be easier to adapt if things change in the future.
If you have other long term docs that will not be as ephemeral as these project docs, you can put them in the /docs folder, ideally with a index.md file.
HIGHLY RECOMMENDED NOTE: If you are only partway through planning, its highly recommended to restart and do the PRD, UX and ARCHITECTURE steps. You could even use your existing documents as inputs letting the agent know you want to redo them with the new workflows. These optimized v6 progressive discovery workflows that also will utilize web search at key moments, while offering better advanced elicitation and part mode in the IDE will produce superior results. And then once all are complete, an epics with stories is generated after the architecture step now - ensuring it uses input from all planing documents.
There is a lot more that is possible with agent customization, which is covered in detail in the [Agent Customization Guide](bmad-customization/agent-customization-guide.md)
CRITICAL NOTE: After you modify the customization file, you need to run the npx installer against your installed location, and choose the option to rebuild all agents, or just do a quick update again. This always builds agents fresh and applies customizations.